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Call For Papers: Special Issue on Controversies on the Usage of AI/ML for Science and Engineering

CiSE seeks submissions for this upcoming special issue.

Important Dates

  • Submissions due: 21 January 2026
  • Publication date: July - September 2026

The past years have seen an explosive growth in the use and adoption of artificial intelligence (AI) and machine learning (ML) frameworks across industries and applications, driven largely by advances in deep learning architectures, increased computational power, and the availability of massive datasets for model training.  Emerging foundational models such as OpenAI’s GPT series and Google’s Gemini have revolutionized natural language processing by enabling zero-shot and few-shot learning capabilities, significantly reducing the need for task-specific training.  Generative models like DALL-E, Stable Diffusion, and ChatGPT have transformed not only creative industries but also scientific research by enabling on-the-fly creation of new content, such as high-quality images, text and even code.  Within the field of Scientific ML (SciML), deep learning (DL) models have demonstrated utility as fast non-intrusive surrogates for expensive high-fidelity models.  They have also been used to enable data-driven physics discovery.

While AI/ML have shown potential for advancing research in various science and engineering applications, applying AI/ML methods within these domains comes with some challenges, including: 

  • Data quality and availability: scientific data are often scarce, noisy and/or incomplete, which limits the training of accurate AI/ML models. 
  • Interpretability: many AI/ML models act as “black boxes,” making it difficult to understand or trust their predictions in scientific applications where explainability is essential.
  • Generalization, robustness and trustworthiness: models trained on specific datasets may not generalize well to new, unseen conditions or scales, which is problematic in scientific applications requiring trusted predictions with quantifiable error bounds.  
  • Systematic refinement mechanisms: unlike traditional discretization methods, it is often not clear how to “refine” an AI/ML model to ensure it satisfies a specified error tolerance and converges to the sought-after physical solution.
  • Physics and structure preservation: AI/ML models do not always respect the physics and structure encoded in the underlying physical problem.
  • Computational cost: training and running large AI/ML models for complex physical systems can require substantial computational resources.
  • Uncertainty quantification: scientific simulations often require precise quantification of uncertainty and error bounds, which many standard AI/ML methods fail to provide.
  • Privacy concerns: an AI/ML model is trained with data containing sensitive, classified or personal information can raise concerns about data breaches and misuse.  

The existence of open questions related to these challenges has led to some controversies related to the usage of AI/ML in science and engineering applications, prompting researchers to pose questions such as: “Is AI leading to a reproducibility crisis in science?” [1], “Can physics-informed neural networks beat the finite element method?” [2], and “What would be a precise, field-appropriate definition of what constitutes a foundational model in computational science, and do existing models claiming to be foundational models satisfy it?” [3].  There are also studies that show that "Weak baselines and reporting biases lead to overoptimism in machine learning” [4]. The goal of this special issue of CiSE is to give authors the opportunity to present their perspectives on potentially controversial topics involving the usage of AI/ML in science and engineering applications as they relate to the challenges itemized above.  Authors are encouraged to include ideas on how to resolve these controversies and/or address/mitigate the challenges/open questions these controversies relate to.  We welcome and anticipate a wide assortment of submissions, ranging from research papers describing new methods/frameworks in the context of this special issue’s theme, to survey papers evaluating/comparing existing methods, to higher-level evidence-based position papers.


Submission Guidelines

For author information and guidelines on submission criteria, visit the Author’s Information page. Articles should be between 2,400 and 6,250 words, including all main body, abstract, keyword, bibliography (25 references or less), and biography text. Each table and figure counts for 250 words.

Please submit papers through the IEEE Author Portal and be sure to select the special issue or special section name. Manuscripts should not be published or currently submitted for publication elsewhere. Please submit only full papers intended for review, not abstracts. If requested, abstracts should be sent by email to the guest editors directly.

In addition to submitting your paper to CiSE, you are also encouraged to upload the data related to your paper to IEEE DataPort. IEEE DataPort is IEEE's data platform that supports the storage and publishing of datasets while also providing access to thousands of research datasets. Uploading your dataset to IEEE DataPort will strengthen your paper and will support research reproducibility. Your paper and the dataset can be linked, providing a good opportunity for you to increase the number of citations you receive. Data can be uploaded to IEEE DataPort prior to submitting your paper or concurrent with the paper submission. Thank you!


We strongly encourage submissions that include multimedia and/or data, which will be featured online. If your submission includes such materials, please let the special issue editors know at:

  • Jonas A. Actor, Sandia National Laboratories, USA
  • Irina Tezaur, Sandia National Laboratories, USA
  • Mohamed Wahib, RKEN Center for Computational Science, Japan
  • Rio Yokota, Tokyo Institute of Technology, Japan
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